Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 AL451000.1-201ENST00000451300 1186 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC6.59□□□□□ -1.35
USH2AO75445 AC008825.2-201ENST00000603374 718 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC010976.2-201ENST00000609697 852 ntBASIC6.59□□□□□ -1.35
USH2AO75445 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC6.59□□□□□ -1.35
USH2AO75445 BX322534.1-201ENST00000635574 241 ntBASIC6.59□□□□□ -1.35
USH2AO75445 AC215524.1-201ENST00000635696 241 ntBASIC6.59□□□□□ -1.35
USH2AO75445 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC6.59□□□□□ -1.35
USH2AO75445 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
USH2AO75445 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
USH2AO75445 AL627095.1-201ENST00000414775 321 ntBASIC6.59□□□□□ -1.36
USH2AO75445 ACTG1P19-201ENST00000418987 1116 ntBASIC6.59□□□□□ -1.36
USH2AO75445 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC6.59□□□□□ -1.36
USH2AO75445 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 B9D1-206ENST00000461069 923 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC6.59□□□□□ -1.36
USH2AO75445 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC6.59□□□□□ -1.36
USH2AO75445 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
USH2AO75445 AC112504.1-201ENST00000623415 1841 ntBASIC6.59□□□□□ -1.36
USH2AO75445 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
USH2AO75445 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 AC092127.1-201ENST00000567093 3455 ntBASIC6.58□□□□□ -1.36
USH2AO75445 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 MIR181D-201ENST00000384853 137 ntBASIC6.58□□□□□ -1.36
USH2AO75445 CDK4P1-201ENST00000454213 828 ntBASIC6.58□□□□□ -1.36
USH2AO75445 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 SERF2-209ENST00000409646 559 ntTSL 4 BASIC6.58□□□□□ -1.36
USH2AO75445 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 F11R-204ENST00000537746 1245 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 AC005274.1-201ENST00000623460 802 ntBASIC6.58□□□□□ -1.36
USH2AO75445 AL357143.1-203ENST00000639750 881 ntBASIC6.58□□□□□ -1.36
USH2AO75445 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
USH2AO75445 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
USH2AO75445 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 AC006058.4-201ENST00000624016 1670 ntBASIC6.58□□□□□ -1.36
USH2AO75445 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms