Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
PDCD6O75340 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
PDCD6O75340 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
PDCD6O75340 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.9□□□□□ -0.34
PDCD6O75340 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.9□□□□□ -0.34
PDCD6O75340 AP000347.1-202ENST00000435868 847 ntBASIC12.9□□□□□ -0.34
PDCD6O75340 HLA-J-203ENST00000494367 1087 ntBASIC12.9□□□□□ -0.34
PDCD6O75340 AC004066.1-201ENST00000502488 802 ntBASIC12.9□□□□□ -0.34
PDCD6O75340 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.9□□□□□ -0.34
PDCD6O75340 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.9□□□□□ -0.34
PDCD6O75340 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.9□□□□□ -0.34
PDCD6O75340 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PDCD6O75340 SNHG9-202ENST00000564014 471 ntBASIC12.9□□□□□ -0.34
PDCD6O75340 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.9□□□□□ -0.34
PDCD6O75340 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.9□□□□□ -0.34
PDCD6O75340 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.9□□□□□ -0.34
PDCD6O75340 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.9□□□□□ -0.34
PDCD6O75340 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PDCD6O75340 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
PDCD6O75340 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
PDCD6O75340 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
PDCD6O75340 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
PDCD6O75340 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
PDCD6O75340 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
PDCD6O75340 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 AC125807.1-201ENST00000483097 614 ntBASIC12.89□□□□□ -0.35
PDCD6O75340 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 TIMM17BP1-201ENST00000545713 516 ntBASIC12.89□□□□□ -0.35
PDCD6O75340 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.89□□□□□ -0.35
PDCD6O75340 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.89□□□□□ -0.35
PDCD6O75340 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.89□□□□□ -0.35
PDCD6O75340 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.89□□□□□ -0.35
PDCD6O75340 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PDCD6O75340 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms