Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 REXO1L2P-201ENST00000425429 2069 ntBASIC17.14■□□□□ 0.33
CHMP2AO43633 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP2AO43633 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP2AO43633 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHMP2AO43633 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.13■□□□□ 0.33
CHMP2AO43633 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CHMP2AO43633 FAM197Y7-201ENST00000432892 766 ntBASIC17.13■□□□□ 0.33
CHMP2AO43633 EIF3FP3-201ENST00000434851 1086 ntBASIC17.13■□□□□ 0.33
CHMP2AO43633 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.13■□□□□ 0.33
CHMP2AO43633 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.13■□□□□ 0.33
CHMP2AO43633 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 AC133552.6-201ENST00000613406 534 ntBASIC17.13■□□□□ 0.33
CHMP2AO43633 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP2AO43633 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP2AO43633 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHMP2AO43633 AC055811.4-201ENST00000624039 1754 ntBASIC17.12■□□□□ 0.33
CHMP2AO43633 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 AL137783.1-201ENST00000623494 1896 ntBASIC17.12■□□□□ 0.33
CHMP2AO43633 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHMP2AO43633 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 KRT223P-202ENST00000449164 1292 ntBASIC17.12■□□□□ 0.33
CHMP2AO43633 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP2AO43633 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP2AO43633 AL359881.2-201ENST00000602973 570 ntBASIC17.12■□□□□ 0.33
CHMP2AO43633 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP2AO43633 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 AC022532.1-201ENST00000624563 1728 ntBASIC17.12■□□□□ 0.33
CHMP2AO43633 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP2AO43633 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CHMP2AO43633 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms