Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 LINC00628-201ENST00000628516 1289 ntBASIC15.87■□□□□ 0.13
CCDC188H7C350 AC105339.1-204ENST00000636249 355 ntBASIC15.87■□□□□ 0.13
CCDC188H7C350 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC188H7C350 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC188H7C350 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC188H7C350 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CCDC188H7C350 FAM58DP-201ENST00000428076 619 ntBASIC15.86■□□□□ 0.13
CCDC188H7C350 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC188H7C350 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.86■□□□□ 0.13
CCDC188H7C350 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 AF228730.6-201ENST00000641497 218 ntBASIC15.86■□□□□ 0.13
CCDC188H7C350 AC084121.3-201ENST00000641716 218 ntBASIC15.86■□□□□ 0.13
CCDC188H7C350 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 ST20-AS1-201ENST00000560255 4223 ntBASIC15.86■□□□□ 0.13
CCDC188H7C350 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CCDC188H7C350 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC188H7C350 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC188H7C350 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC188H7C350 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC188H7C350 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC188H7C350 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC188H7C350 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC188H7C350 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 HTR5BP-201ENST00000430851 1154 ntBASIC15.85■□□□□ 0.13
CCDC188H7C350 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms