Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV6-7A0A0A0MS04 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC018529.2-202ENST00000611482 3087 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL356585.2-201ENST00000625078 2396 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TOMM22P5-201ENST00000416399 439 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KRT18P43-201ENST00000469825 1281 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL512356.2-201ENST00000546955 174 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 MIR3687-2-201ENST00000577708 61 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 MIR3687-1-201ENST00000614492 61 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 PPT1-213ENST00000641319 2388 ntBASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.78□□□□□ -0.36
TRBV6-7A0A0A0MS04 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV6-7A0A0A0MS04 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms