Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 AC003102.2-201ENST00000589195 1469 ntBASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 AC006058.4-201ENST00000624016 1670 ntBASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LEMD3Q9Y2U8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 AP000845.1-201ENST00000581677 2131 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ACTG1P2-201ENST00000415776 1125 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ACTG1P11-201ENST00000425411 1125 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 AC012441.2-201ENST00000444843 739 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 RN7SL574P-201ENST00000581512 297 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 DOC2GP-204ENST00000639052 2548 ntBASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LEMD3Q9Y2U8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 HLA-J-204ENST00000495278 958 ntBASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 BX088702.1-201ENST00000610784 235 ntBASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LEMD3Q9Y2U8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LEMD3Q9Y2U8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.27■□□□□ 0.52
LEMD3Q9Y2U8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.27■□□□□ 0.52
LEMD3Q9Y2U8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.27■□□□□ 0.52
LEMD3Q9Y2U8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms