Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MACF1Q9UPN3 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AL049792.1-201ENST00000424708 1262 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CETN3-205ENST00000522842 664 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 RN7SL460P-201ENST00000582806 258 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SNX20-205ENST00000610485 557 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC106820.2-201ENST00000563775 3264 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC006058.4-201ENST00000624016 1670 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 FTLP3-201ENST00000427242 528 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC138696.2-201ENST00000607376 223 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 RHBDF1P1-201ENST00000427504 1941 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 Z84721.1-201ENST00000438841 372 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC006547.1-210ENST00000609644 589 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC104333.3-201ENST00000449334 479 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 RN7SL530P-201ENST00000485097 298 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 YY1P2-201ENST00000438766 948 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 IGLCOR22-1-201ENST00000523725 316 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 MIR378I-201ENST00000582688 76 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CDIPT-AS1-203ENST00000638164 713 ntBASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MACF1Q9UPN3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms