Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC092933.1-201ENST00000393644 945 ntBASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 GNRHR2-203ENST00000581100 1187 ntBASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC023090.2-201ENST00000625182 2110 ntBASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC103702.1-201ENST00000548801 2630 ntBASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 FGD5P1-202ENST00000614866 2498 ntBASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 BCRP2-202ENST00000447763 634 ntBASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 BCRP6-201ENST00000510112 632 ntBASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 BCRP7-201ENST00000511549 544 ntBASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHA4Q9UN74 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AC005034.1-201ENST00000426657 489 ntBASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AL022328.1-201ENST00000610050 478 ntBASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 AC018665.1-201ENST00000622927 1362 ntBASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PCDHA4Q9UN74 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms