Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 AC007614.5-201ENST00000623424 8892 ntBASIC12.84□□□□□ -0.35
MBD2Q9UBB5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MBD2Q9UBB5 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
MBD2Q9UBB5 AL589702.1-201ENST00000641229 1509 ntBASIC12.83□□□□□ -0.35
MBD2Q9UBB5 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC015802.1-201ENST00000588104 1449 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC073508.3-201ENST00000619697 1419 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 TPSP2-201ENST00000561760 610 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 MIR3909-201ENST00000579518 119 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 AC006011.2-201ENST00000621313 1158 ntBASIC12.83□□□□□ -0.36
MBD2Q9UBB5 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.83□□□□□ -0.36
MBD2Q9UBB5 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MBD2Q9UBB5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms