Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRMT13Q9NUP7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RN7SKP214-201ENST00000364208 315 ntBASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 AC010141.1-201ENST00000411585 623 ntBASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 KLF2P1-201ENST00000447438 1042 ntBASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RTN3P1-201ENST00000536295 711 ntBASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.57■□□□□ 0.24
TRMT13Q9NUP7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 RCC2P8-201ENST00000502779 1035 ntBASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 IGLV3-15-201ENST00000518356 244 ntBASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 RN7SL555P-201ENST00000584742 339 ntBASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRMT13Q9NUP7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 REXO1L4P-201ENST00000605109 1937 ntBASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRMT13Q9NUP7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms