Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 OR8S1-201ENST00000310194 1080 ntBASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 RBPMS2P1-201ENST00000437762 623 ntBASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 RN7SL589P-201ENST00000481268 310 ntBASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.58□□□□□ -0.07
CCM2LQ9NUG4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 MIR600HG-201ENST00000449175 5984 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 HLA-V-201ENST00000429037 534 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 MEIS3P1-201ENST00000495167 958 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AC140878.1-201ENST00000565277 250 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AL138918.1-201ENST00000568306 659 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AC027307.3-201ENST00000594262 1100 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AL359881.2-201ENST00000602973 570 ntBASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.58□□□□□ -0.08
CCM2LQ9NUG4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms