Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 AC009407.1-201ENST00000568958 598 ntBASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXP3Q9BZS1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 AC009477.1-201ENST00000452936 217 ntBASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 AC007787.1-201ENST00000588095 1583 ntBASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
FOXP3Q9BZS1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 REXO1L4P-201ENST00000605109 1937 ntBASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 NME2P1-201ENST00000426182 414 ntBASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms