Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
S1PR3Q99500 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 LINC00528-201ENST00000600723 2160 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 KRT18P64-201ENST00000434946 1219 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.65□□□□□ -0.38
S1PR3Q99500 RNA5SP421-201ENST00000516864 134 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.65□□□□□ -0.38
S1PR3Q99500 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 ZNF890P-202ENST00000530367 1156 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 LINC01115-203ENST00000606068 577 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AL844908.2-201ENST00000609461 460 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 AL121723.1-201ENST00000445194 1519 ntBASIC12.65□□□□□ -0.38
S1PR3Q99500 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
S1PR3Q99500 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.65□□□□□ -0.38
S1PR3Q99500 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
S1PR3Q99500 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
S1PR3Q99500 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms