Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SNX27Q96L92 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX27Q96L92 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.39■□□□□ 0.21
SNX27Q96L92 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX27Q96L92 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX27Q96L92 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SNX27Q96L92 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
SNX27Q96L92 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX27Q96L92 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX27Q96L92 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.38■□□□□ 0.21
SNX27Q96L92 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.38■□□□□ 0.21
SNX27Q96L92 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 C2orf69P2-201ENST00000562032 1123 ntBASIC16.38■□□□□ 0.21
SNX27Q96L92 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX27Q96L92 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.38■□□□□ 0.21
SNX27Q96L92 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 CLUHP2-201ENST00000426660 1303 ntBASIC16.38■□□□□ 0.21
SNX27Q96L92 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX27Q96L92 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX27Q96L92 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX27Q96L92 LILRP1-201ENST00000444199 1370 ntBASIC16.38■□□□□ 0.21
SNX27Q96L92 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 AC138035.3-201ENST00000622706 2791 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX27Q96L92 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.37■□□□□ 0.21
SNX27Q96L92 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 FAM8A4P-201ENST00000435433 1213 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.37■□□□□ 0.21
SNX27Q96L92 AP003171.2-201ENST00000528208 925 ntBASIC16.37■□□□□ 0.21
SNX27Q96L92 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.37■□□□□ 0.21
SNX27Q96L92 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.37■□□□□ 0.21
SNX27Q96L92 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SNX27Q96L92 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNX27Q96L92 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.37■□□□□ 0.21
SNX27Q96L92 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms