Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 DRD5P1-201ENST00000456605 1438 ntBASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TTC9CQ8N5M4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC067750.1-201ENST00000608826 6545 ntBASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 REXO1L4P-201ENST00000605109 1937 ntBASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC055876.2-201ENST00000531834 546 ntBASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AC004790.1-201ENST00000612686 536 ntBASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TTC9CQ8N5M4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 AL645937.2-201ENST00000396808 931 ntBASIC12.09□□□□□ -0.47
TTC9CQ8N5M4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms