Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AC055811.4-201ENST00000624039 1754 ntBASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 ANKRD19P-201ENST00000338192 862 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CNN2P8-201ENST00000421872 913 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 KRT223P-202ENST00000449164 1292 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 DUX4L47-201ENST00000566374 394 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AL008721.1-201ENST00000609964 604 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AC013268.4-201ENST00000637413 2228 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AP002414.2-201ENST00000591780 3365 ntBASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRRTM4Q86VH4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 TSPY26P-202ENST00000565928 3884 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 TPM3P8-201ENST00000330554 643 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 FAM197Y7-201ENST00000432892 766 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AC244107.1-201ENST00000442033 332 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 RNA5SP486-201ENST00000515961 83 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 AC079316.1-201ENST00000548397 411 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 ENPP7P14-201ENST00000621765 1040 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 RHOXF1P1-202ENST00000635473 501 ntBASIC14.93□□□□□ -0.02
LRRTM4Q86VH4 COX11-210ENST00000639671 696 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms