Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.42■□□□□ 0.06
RAPH1Q70E73 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.42■□□□□ 0.06
RAPH1Q70E73 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAPH1Q70E73 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 RPSAP43-201ENST00000402237 625 ntBASIC15.41■□□□□ 0.06
RAPH1Q70E73 AC074338.1-201ENST00000416825 156 ntBASIC15.41■□□□□ 0.06
RAPH1Q70E73 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 UPF3AP3-201ENST00000420996 769 ntBASIC15.41■□□□□ 0.06
RAPH1Q70E73 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 LINC00628-201ENST00000628516 1289 ntBASIC15.41■□□□□ 0.06
RAPH1Q70E73 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.41■□□□□ 0.06
RAPH1Q70E73 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.41■□□□□ 0.06
RAPH1Q70E73 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAPH1Q70E73 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AP000845.1-201ENST00000581677 2131 ntBASIC15.4■□□□□ 0.06
RAPH1Q70E73 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 GHSR-202ENST00000427970 912 ntBASIC15.4■□□□□ 0.06
RAPH1Q70E73 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AP000347.1-202ENST00000435868 847 ntBASIC15.4■□□□□ 0.06
RAPH1Q70E73 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AL033527.5-202ENST00000641632 1098 ntBASIC15.4■□□□□ 0.06
RAPH1Q70E73 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 REXO1L2P-201ENST00000425429 2069 ntBASIC15.4■□□□□ 0.06
RAPH1Q70E73 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms