Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.08
RIF1Q5UIP0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIF1Q5UIP0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC011676.5-201ENST00000624864 2660 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC124068.2-201ENST00000569473 1109 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC006449.5-201ENST00000610658 2098 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC226150.1-201ENST00000544259 466 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 HERC2P11-201ENST00000562845 725 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC100756.2-201ENST00000569537 736 ntBASIC14.51□□□□□ -0.09
RIF1Q5UIP0 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.51□□□□□ -0.09
RIF1Q5UIP0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.5□□□□□ -0.09
RIF1Q5UIP0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AC020904.3-201ENST00000624199 442 ntBASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AC110057.1-201ENST00000636031 898 ntBASIC14.5□□□□□ -0.09
RIF1Q5UIP0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AL137077.2-201ENST00000635124 1608 ntBASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.5□□□□□ -0.09
RIF1Q5UIP0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
RIF1Q5UIP0 ABHD17AP9-201ENST00000561925 548 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms