Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
RC3H1Q5TC82 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RC3H1Q5TC82 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RC3H1Q5TC82 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RC3H1Q5TC82 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
RC3H1Q5TC82 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AL583805.1-201ENST00000391389 531 ntBASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AC097065.1-201ENST00000425737 517 ntBASIC18.83■□□□□ 0.6
RC3H1Q5TC82 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AL627422.1-201ENST00000434104 580 ntBASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 RPSAP15-201ENST00000448168 861 ntBASIC18.83■□□□□ 0.6
RC3H1Q5TC82 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 KRT8P31-201ENST00000504812 1408 ntBASIC18.83■□□□□ 0.6
RC3H1Q5TC82 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.83■□□□□ 0.6
RC3H1Q5TC82 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 KRT18P9-201ENST00000604826 1300 ntBASIC18.82■□□□□ 0.6
RC3H1Q5TC82 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 KRT18P36-201ENST00000411618 1276 ntBASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 RBM8B-201ENST00000555532 525 ntBASIC18.82■□□□□ 0.6
RC3H1Q5TC82 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 MIR6858-201ENST00000620733 67 ntBASIC18.82■□□□□ 0.6
RC3H1Q5TC82 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 AC023090.2-201ENST00000625182 2110 ntBASIC18.82■□□□□ 0.6
RC3H1Q5TC82 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RC3H1Q5TC82 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 TSPY25P-201ENST00000429463 745 ntBASIC18.81■□□□□ 0.6
RC3H1Q5TC82 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 RPL18AP3-201ENST00000462885 528 ntBASIC18.81■□□□□ 0.6
RC3H1Q5TC82 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RC3H1Q5TC82 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms