Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 AC099568.2-201ENST00000609194 695 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDR2Q01850 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.29■□□□□ 0.2
CDR2Q01850 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CDR2Q01850 LINC00552-201ENST00000625151 2579 ntBASIC16.29■□□□□ 0.2
CDR2Q01850 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDR2Q01850 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.28■□□□□ 0.2
CDR2Q01850 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDR2Q01850 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.28■□□□□ 0.2
CDR2Q01850 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDR2Q01850 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.28■□□□□ 0.2
CDR2Q01850 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CDR2Q01850 SLC7A15P-201ENST00000424028 1363 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.27■□□□□ 0.2
CDR2Q01850 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDR2Q01850 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 AL158070.2-201ENST00000623713 1621 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.27■□□□□ 0.2
CDR2Q01850 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDR2Q01850 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 AL645937.2-201ENST00000396808 931 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 HLA-K-203ENST00000430151 1046 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 SPTLC1P1-201ENST00000447199 261 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.27■□□□□ 0.2
CDR2Q01850 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.27■□□□□ 0.2
CDR2Q01850 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
CDR2Q01850 AC055876.2-201ENST00000531834 546 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
CDR2Q01850 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDR2Q01850 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.27■□□□□ 0.2
CDR2Q01850 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.27■□□□□ 0.2
CDR2Q01850 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.27■□□□□ 0.2
CDR2Q01850 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.27■□□□□ 0.2
CDR2Q01850 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.27■□□□□ 0.2
CDR2Q01850 AC093813.1-201ENST00000605066 256 ntBASIC16.27■□□□□ 0.2
CDR2Q01850 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.27■□□□□ 0.2
CDR2Q01850 AC009118.2-201ENST00000613275 655 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms