Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 AL365209.1-201ENST00000624418 6473 ntBASIC14.74□□□□□ -0.05
HMGCS1Q01581 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 CLK3P2-201ENST00000427566 1453 ntBASIC14.74□□□□□ -0.05
HMGCS1Q01581 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGCS1Q01581 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGCS1Q01581 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AL157414.3-201ENST00000624276 1954 ntBASIC14.73□□□□□ -0.05
HMGCS1Q01581 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 MEIS3P1-201ENST00000495167 958 ntBASIC14.73□□□□□ -0.05
HMGCS1Q01581 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AC008738.7-201ENST00000609744 511 ntBASIC14.73□□□□□ -0.05
HMGCS1Q01581 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms