Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX6-1P78426 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.55□□□□□ -0.24
NKX6-1P78426 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-1P78426 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-1P78426 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NKX6-1P78426 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 PFN1P12-201ENST00000455938 534 ntBASIC13.54□□□□□ -0.24
NKX6-1P78426 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AC036164.1-201ENST00000570544 333 ntBASIC13.54□□□□□ -0.24
NKX6-1P78426 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.54□□□□□ -0.24
NKX6-1P78426 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.54□□□□□ -0.24
NKX6-1P78426 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NKX6-1P78426 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NKX6-1P78426 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.54□□□□□ -0.24
NKX6-1P78426 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 CICP4-201ENST00000447359 2812 ntBASIC13.53□□□□□ -0.24
NKX6-1P78426 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX6-1P78426 AC099336.1-201ENST00000417053 1171 ntBASIC13.53□□□□□ -0.24
NKX6-1P78426 ACTG1P3-201ENST00000431775 1114 ntBASIC13.53□□□□□ -0.24
NKX6-1P78426 CSF2RBP1-201ENST00000447905 391 ntBASIC13.53□□□□□ -0.24
NKX6-1P78426 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX6-1P78426 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX6-1P78426 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX6-1P78426 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms