Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH13P55290 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDH13P55290 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH13P55290 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH13P55290 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 AC087499.5-201ENST00000452760 1342 ntBASIC14.97□□□□□ -0.01
CDH13P55290 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH13P55290 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH13P55290 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CDH13P55290 AC140878.1-201ENST00000565277 250 ntBASIC14.97□□□□□ -0.01
CDH13P55290 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH13P55290 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH13P55290 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH13P55290 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH13P55290 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH13P55290 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH13P55290 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH13P55290 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH13P55290 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH13P55290 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH13P55290 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 AC018442.1-201ENST00000421439 2061 ntBASIC14.96□□□□□ -0.01
CDH13P55290 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH13P55290 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH13P55290 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH13P55290 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH13P55290 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH13P55290 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 AC097493.3-201ENST00000509725 367 ntBASIC14.96□□□□□ -0.01
CDH13P55290 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH13P55290 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 AC004461.2-201ENST00000629517 803 ntBASIC14.96□□□□□ -0.01
CDH13P55290 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms