Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 NKAPP1-205ENST00000585790 367 ntBASIC12.32□□□□□ -0.44
RAB5CP51148 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 SPTSSB-204ENST00000617024 1292 ntBASIC12.32□□□□□ -0.44
RAB5CP51148 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RAB5CP51148 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
RAB5CP51148 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
RAB5CP51148 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB5CP51148 AC004899.2-201ENST00000622993 3860 ntBASIC12.32□□□□□ -0.44
RAB5CP51148 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB5CP51148 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB5CP51148 IGHV3-47-201ENST00000425060 335 ntBASIC12.31□□□□□ -0.44
RAB5CP51148 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 PHKG1P2-201ENST00000457537 863 ntBASIC12.31□□□□□ -0.44
RAB5CP51148 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RAB5CP51148 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB5CP51148 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB5CP51148 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB5CP51148 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms