Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 AC041040.2-201ENST00000622926 2899 ntBASIC13.5□□□□□ -0.25
SOX2P48431 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.5□□□□□ -0.25
SOX2P48431 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
SOX2P48431 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX2P48431 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SOX2P48431 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.5□□□□□ -0.25
SOX2P48431 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 FO393414.2-201ENST00000405153 598 ntBASIC13.5□□□□□ -0.25
SOX2P48431 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 AC005237.2-201ENST00000434368 219 ntBASIC13.5□□□□□ -0.25
SOX2P48431 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 AC055717.3-201ENST00000622967 595 ntBASIC13.5□□□□□ -0.25
SOX2P48431 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 AC084121.4-201ENST00000641598 221 ntBASIC13.5□□□□□ -0.25
SOX2P48431 AF228730.8-201ENST00000642140 221 ntBASIC13.5□□□□□ -0.25
SOX2P48431 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 AC006504.5-208ENST00000588784 2401 ntBASIC13.5□□□□□ -0.25
SOX2P48431 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SOX2P48431 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SOX2P48431 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
SOX2P48431 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
SOX2P48431 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 AL031595.1-201ENST00000623969 4709 ntBASIC13.49□□□□□ -0.25
SOX2P48431 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 AC113367.3-201ENST00000508316 1912 ntBASIC13.49□□□□□ -0.25
SOX2P48431 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SOX2P48431 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SOX2P48431 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 MTND6P24-201ENST00000440466 518 ntBASIC13.49□□□□□ -0.25
SOX2P48431 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX2P48431 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX2P48431 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX2P48431 ALG1L8P-201ENST00000533887 760 ntBASIC13.49□□□□□ -0.25
SOX2P48431 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.49□□□□□ -0.25
SOX2P48431 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX2P48431 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX2P48431 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.49□□□□□ -0.25
SOX2P48431 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.49□□□□□ -0.25
SOX2P48431 AC018529.1-201ENST00000613063 361 ntBASIC13.49□□□□□ -0.25
SOX2P48431 BX640515.1-201ENST00000617215 977 ntBASIC13.49□□□□□ -0.25
SOX2P48431 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.49□□□□□ -0.25
SOX2P48431 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SOX2P48431 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.49□□□□□ -0.25
SOX2P48431 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms