Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 AC079781.3-201ENST00000449110 356 ntBASIC10.37□□□□□ -0.75
CXCL5P42830 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CXCL5P42830 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
CXCL5P42830 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 AC145285.3-201ENST00000564603 959 ntBASIC10.37□□□□□ -0.75
CXCL5P42830 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.37□□□□□ -0.75
CXCL5P42830 AC018845.2-201ENST00000568326 409 ntBASIC10.37□□□□□ -0.75
CXCL5P42830 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.37□□□□□ -0.75
CXCL5P42830 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.37□□□□□ -0.75
CXCL5P42830 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.37□□□□□ -0.75
CXCL5P42830 AL359881.3-201ENST00000602640 1721 ntBASIC10.37□□□□□ -0.75
CXCL5P42830 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CXCL5P42830 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.37□□□□□ -0.75
CXCL5P42830 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CXCL5P42830 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 AC131902.2-201ENST00000566892 2172 ntBASIC10.36□□□□□ -0.75
CXCL5P42830 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
CXCL5P42830 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CXCL5P42830 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 FO393414.2-201ENST00000405153 598 ntBASIC10.36□□□□□ -0.75
CXCL5P42830 AL353705.2-201ENST00000428243 662 ntBASIC10.36□□□□□ -0.75
CXCL5P42830 AL671277.1-201ENST00000429656 993 ntBASIC10.36□□□□□ -0.75
CXCL5P42830 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.36□□□□□ -0.75
CXCL5P42830 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.36□□□□□ -0.75
CXCL5P42830 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.36□□□□□ -0.75
CXCL5P42830 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.36□□□□□ -0.75
CXCL5P42830 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CXCL5P42830 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.36□□□□□ -0.75
CXCL5P42830 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 AC106730.1-201ENST00000566722 1090 ntBASIC10.36□□□□□ -0.75
CXCL5P42830 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
CXCL5P42830 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
CXCL5P42830 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms