Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT9P35527 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT9P35527 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT9P35527 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT9P35527 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
KRT9P35527 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 Z97205.2-201ENST00000564697 1639 ntBASIC16.74■□□□□ 0.27
KRT9P35527 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KRT9P35527 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT9P35527 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT9P35527 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
KRT9P35527 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT9P35527 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT9P35527 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT9P35527 IGHV3-42-201ENST00000520410 361 ntBASIC16.74■□□□□ 0.27
KRT9P35527 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
KRT9P35527 AL512361.1-201ENST00000554200 418 ntBASIC16.74■□□□□ 0.27
KRT9P35527 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.74■□□□□ 0.27
KRT9P35527 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT9P35527 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 AC018442.1-201ENST00000421439 2061 ntBASIC16.74■□□□□ 0.27
KRT9P35527 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
KRT9P35527 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
KRT9P35527 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT9P35527 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 AC087499.5-201ENST00000452760 1342 ntBASIC16.73■□□□□ 0.27
KRT9P35527 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 AL133267.1-201ENST00000398220 340 ntBASIC16.73■□□□□ 0.27
KRT9P35527 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT9P35527 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT9P35527 AC092580.3-201ENST00000430932 139 ntBASIC16.73■□□□□ 0.27
KRT9P35527 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.73■□□□□ 0.27
KRT9P35527 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 SDHAP3-202ENST00000515467 728 ntBASIC16.73■□□□□ 0.27
KRT9P35527 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 DUX4L27-201ENST00000554796 1261 ntBASIC16.73■□□□□ 0.27
KRT9P35527 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 AC010336.2-201ENST00000564226 506 ntBASIC16.73■□□□□ 0.27
KRT9P35527 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT9P35527 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.73■□□□□ 0.27
KRT9P35527 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
KRT9P35527 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms