Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 AC012508.2-201ENST00000567613 1472 ntBASIC20.93■□□□□ 0.94
CPS1P31327 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPS1P31327 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.93■□□□□ 0.94
CPS1P31327 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.93■□□□□ 0.94
CPS1P31327 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPS1P31327 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.93■□□□□ 0.94
CPS1P31327 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.93■□□□□ 0.94
CPS1P31327 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.93■□□□□ 0.94
CPS1P31327 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.93■□□□□ 0.94
CPS1P31327 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 AC004686.1-201ENST00000605113 538 ntBASIC20.93■□□□□ 0.94
CPS1P31327 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 AC002044.2-201ENST00000624910 970 ntBASIC20.93■□□□□ 0.94
CPS1P31327 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPS1P31327 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.93■□□□□ 0.94
CPS1P31327 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPS1P31327 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 CYP4F23P-201ENST00000593402 1579 ntBASIC20.92■□□□□ 0.94
CPS1P31327 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPS1P31327 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.92■□□□□ 0.94
CPS1P31327 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CPS1P31327 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 AC023141.7-201ENST00000430646 407 ntBASIC20.92■□□□□ 0.94
CPS1P31327 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 AC026470.1-201ENST00000478038 846 ntBASIC20.92■□□□□ 0.94
CPS1P31327 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.92■□□□□ 0.94
CPS1P31327 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CPS1P31327 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC20.92■□□□□ 0.94
CPS1P31327 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.92■□□□□ 0.94
CPS1P31327 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 CICP11-201ENST00000434745 2827 ntBASIC20.92■□□□□ 0.94
CPS1P31327 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPS1P31327 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPS1P31327 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.92■□□□□ 0.94
CPS1P31327 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPS1P31327 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 LINC02199-201ENST00000506655 2702 ntBASIC20.91■□□□□ 0.94
CPS1P31327 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CPS1P31327 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.91■□□□□ 0.94
CPS1P31327 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.91■□□□□ 0.94
CPS1P31327 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.91■□□□□ 0.94
CPS1P31327 RN7SL494P-201ENST00000461517 304 ntBASIC20.91■□□□□ 0.94
CPS1P31327 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.91■□□□□ 0.94
CPS1P31327 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.91■□□□□ 0.94
CPS1P31327 AC083801.1-201ENST00000491689 358 ntBASIC20.91■□□□□ 0.94
CPS1P31327 RNA5SP417-201ENST00000516459 108 ntBASIC20.91■□□□□ 0.94
CPS1P31327 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC20.91■□□□□ 0.94
CPS1P31327 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.91■□□□□ 0.94
CPS1P31327 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.91■□□□□ 0.94
CPS1P31327 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.91■□□□□ 0.94
CPS1P31327 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.91■□□□□ 0.94
CPS1P31327 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.91■□□□□ 0.94
CPS1P31327 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 PRORSD1P-202ENST00000563365 2154 ntBASIC20.91■□□□□ 0.94
CPS1P31327 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPS1P31327 MARK2P16-201ENST00000605714 1723 ntBASIC20.91■□□□□ 0.94
CPS1P31327 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms