Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.6□□□□□ -0.23
HOXC12P31275 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXC12P31275 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.6□□□□□ -0.23
HOXC12P31275 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXC12P31275 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXC12P31275 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HOXC12P31275 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HOXC12P31275 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.59□□□□□ -0.23
HOXC12P31275 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 ENPP7P5-201ENST00000541031 1031 ntBASIC13.59□□□□□ -0.23
HOXC12P31275 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.59□□□□□ -0.23
HOXC12P31275 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.59□□□□□ -0.23
HOXC12P31275 AC093813.1-201ENST00000605066 256 ntBASIC13.59□□□□□ -0.23
HOXC12P31275 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HOXC12P31275 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HOXC12P31275 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.59□□□□□ -0.23
HOXC12P31275 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
HOXC12P31275 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.58□□□□□ -0.23
HOXC12P31275 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HOXC12P31275 AC084364.1-201ENST00000551967 1556 ntBASIC13.58□□□□□ -0.23
HOXC12P31275 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HOXC12P31275 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
HOXC12P31275 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
HOXC12P31275 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
HOXC12P31275 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.58□□□□□ -0.23
HOXC12P31275 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms