Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 AC067930.6-201ENST00000623257 4947 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PTPN6P29350 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 SPTLC1P1-201ENST00000447199 261 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.49□□□□□ -0.09
PTPN6P29350 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.49□□□□□ -0.09
PTPN6P29350 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PTPN6P29350 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PTPN6P29350 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN6P29350 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN6P29350 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PTPN6P29350 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN6P29350 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PTPN6P29350 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.48□□□□□ -0.09
PTPN6P29350 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
PTPN6P29350 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN6P29350 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.48□□□□□ -0.09
PTPN6P29350 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.48□□□□□ -0.09
PTPN6P29350 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.48□□□□□ -0.09
PTPN6P29350 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.48□□□□□ -0.09
PTPN6P29350 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PTPN6P29350 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.48□□□□□ -0.09
PTPN6P29350 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 AC004461.2-201ENST00000629517 803 ntBASIC14.48□□□□□ -0.09
PTPN6P29350 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 HSPA7-201ENST00000445535 1927 ntBASIC14.48□□□□□ -0.09
PTPN6P29350 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.48□□□□□ -0.09
PTPN6P29350 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
PTPN6P29350 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PTPN6P29350 LILRP1-201ENST00000444199 1370 ntBASIC14.47□□□□□ -0.09
PTPN6P29350 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN6P29350 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PTPN6P29350 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
PTPN6P29350 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN6P29350 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
PTPN6P29350 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PTPN6P29350 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms