Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.24■□□□□ 0.03
HTR1BP28222 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HTR1BP28222 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.24■□□□□ 0.03
HTR1BP28222 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HTR1BP28222 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HTR1BP28222 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.24■□□□□ 0.03
HTR1BP28222 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
HTR1BP28222 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
HTR1BP28222 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.24■□□□□ 0.03
HTR1BP28222 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HTR1BP28222 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HTR1BP28222 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.23■□□□□ 0.03
HTR1BP28222 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HTR1BP28222 RPL5P21-201ENST00000404620 815 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.23■□□□□ 0.03
HTR1BP28222 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 AC114812.1-204ENST00000449669 728 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 FO681548.1-201ENST00000455617 1132 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 AC004066.1-201ENST00000502488 802 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 AC119751.2-201ENST00000504529 210 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 AC106760.1-201ENST00000508690 800 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.23■□□□□ 0.03
HTR1BP28222 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.23■□□□□ 0.03
HTR1BP28222 MIR4259-201ENST00000584466 101 ntBASIC15.23■□□□□ 0.03
HTR1BP28222 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.23■□□□□ 0.03
HTR1BP28222 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HTR1BP28222 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HTR1BP28222 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HTR1BP28222 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.23■□□□□ 0.03
HTR1BP28222 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HTR1BP28222 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 KRT8P35-201ENST00000483942 1338 ntBASIC15.22■□□□□ 0.03
HTR1BP28222 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1BP28222 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1BP28222 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1BP28222 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HTR1BP28222 ANKRD19P-201ENST00000338192 862 ntBASIC15.22■□□□□ 0.03
HTR1BP28222 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HTR1BP28222 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 AP000812.2-201ENST00000538934 718 ntBASIC15.22■□□□□ 0.03
HTR1BP28222 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.22■□□□□ 0.03
HTR1BP28222 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.22■□□□□ 0.03
HTR1BP28222 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.22■□□□□ 0.03
HTR1BP28222 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1BP28222 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.22■□□□□ 0.03
HTR1BP28222 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.22■□□□□ 0.03
HTR1BP28222 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HTR1BP28222 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms