Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
CHMP24386 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.33□□□□□ -0.12
CHMP24386 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP24386 MEP1AP4-201ENST00000423244 1087 ntBASIC14.33□□□□□ -0.12
CHMP24386 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.33□□□□□ -0.12
CHMP24386 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP24386 DOC2GP-202ENST00000514950 1163 ntBASIC14.33□□□□□ -0.12
CHMP24386 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP24386 AC104794.3-201ENST00000566840 1248 ntBASIC14.33□□□□□ -0.12
CHMP24386 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.33□□□□□ -0.12
CHMP24386 AC097359.3-201ENST00000603982 1210 ntBASIC14.33□□□□□ -0.12
CHMP24386 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHMP24386 MYO15B-237ENST00000642007 4893 ntBASIC14.33□□□□□ -0.12
CHMP24386 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.33□□□□□ -0.12
CHMP24386 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CHMP24386 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.33□□□□□ -0.12
CHMP24386 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.33□□□□□ -0.12
CHMP24386 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 AL391825.1-201ENST00000457671 1364 ntBASIC14.33□□□□□ -0.12
CHMP24386 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CHMP24386 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHMP24386 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.32□□□□□ -0.12
CHMP24386 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 AC136604.1-201ENST00000418535 575 ntBASIC14.32□□□□□ -0.12
CHMP24386 AL353779.1-201ENST00000434793 351 ntBASIC14.32□□□□□ -0.12
CHMP24386 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
CHMP24386 CRB3P1-201ENST00000449338 276 ntBASIC14.32□□□□□ -0.12
CHMP24386 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.32□□□□□ -0.12
CHMP24386 AC093004.1-201ENST00000508850 424 ntBASIC14.32□□□□□ -0.12
CHMP24386 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.32□□□□□ -0.12
CHMP24386 HNRNPUP1-201ENST00000554987 333 ntBASIC14.32□□□□□ -0.12
CHMP24386 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.32□□□□□ -0.12
CHMP24386 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.32□□□□□ -0.12
CHMP24386 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CHMP24386 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHMP24386 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CHMP24386 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.31□□□□□ -0.12
CHMP24386 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
CHMP24386 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CHMP24386 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 AC087499.6-201ENST00000411576 835 ntBASIC14.31□□□□□ -0.12
CHMP24386 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHMP24386 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
CHMP24386 DFFBP1-201ENST00000433250 979 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms