Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.2□□□□□ -0.14
UBL4AP11441 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBL4AP11441 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
UBL4AP11441 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.2□□□□□ -0.14
UBL4AP11441 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.2□□□□□ -0.14
UBL4AP11441 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBL4AP11441 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.2□□□□□ -0.14
UBL4AP11441 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBL4AP11441 OR2I1P-209ENST00000641730 5365 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
UBL4AP11441 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 AC091951.1-201ENST00000512854 2465 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 AC041040.2-201ENST00000622926 2899 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 SPDYE19P-201ENST00000338590 713 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 MEP1AP4-201ENST00000423244 1087 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 GHSR-202ENST00000427970 912 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.19□□□□□ -0.14
UBL4AP11441 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.19□□□□□ -0.14
UBL4AP11441 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBL4AP11441 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 RARRES2P5-201ENST00000564013 466 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
UBL4AP11441 AL391069.4-201ENST00000609583 481 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 AC009118.2-201ENST00000613275 655 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.19□□□□□ -0.14
UBL4AP11441 AL645728.2-202ENST00000641679 227 ntBASIC14.19□□□□□ -0.14
UBL4AP11441 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
UBL4AP11441 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBL4AP11441 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.19□□□□□ -0.14
UBL4AP11441 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.19□□□□□ -0.14
UBL4AP11441 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.18□□□□□ -0.14
UBL4AP11441 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.18□□□□□ -0.14
UBL4AP11441 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.18□□□□□ -0.14
UBL4AP11441 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBL4AP11441 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms