Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 AC055811.4-201ENST00000624039 1754 ntBASIC11.88□□□□□ -0.51
CXCL1P09341 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CXCL1P09341 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.88□□□□□ -0.51
CXCL1P09341 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.88□□□□□ -0.51
CXCL1P09341 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.88□□□□□ -0.51
CXCL1P09341 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 AL732292.2-201ENST00000609649 430 ntBASIC11.88□□□□□ -0.51
CXCL1P09341 AC092119.3-201ENST00000612618 583 ntBASIC11.88□□□□□ -0.51
CXCL1P09341 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
CXCL1P09341 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CXCL1P09341 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.88□□□□□ -0.51
CXCL1P09341 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CXCL1P09341 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CXCL1P09341 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CXCL1P09341 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 AC073621.1-201ENST00000392730 636 ntBASIC11.87□□□□□ -0.51
CXCL1P09341 MRPL20P1-201ENST00000400819 433 ntBASIC11.87□□□□□ -0.51
CXCL1P09341 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.87□□□□□ -0.51
CXCL1P09341 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.87□□□□□ -0.51
CXCL1P09341 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 MIR4321-201ENST00000592276 80 ntBASIC11.87□□□□□ -0.51
CXCL1P09341 AL121772.3-201ENST00000610840 674 ntBASIC11.87□□□□□ -0.51
CXCL1P09341 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
CXCL1P09341 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CXCL1P09341 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.87□□□□□ -0.51
CXCL1P09341 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CXCL1P09341 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL1P09341 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL1P09341 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL1P09341 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL1P09341 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms