Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HMGN2P05204 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN2P05204 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN2P05204 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN2P05204 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.27□□□□□ -0.12
HMGN2P05204 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HMGN2P05204 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HMGN2P05204 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 AL353779.1-201ENST00000434793 351 ntBASIC14.27□□□□□ -0.13
HMGN2P05204 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 RPL13AP25-201ENST00000484130 612 ntBASIC14.27□□□□□ -0.13
HMGN2P05204 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 AC093004.1-201ENST00000508850 424 ntBASIC14.27□□□□□ -0.13
HMGN2P05204 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN2P05204 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGN2P05204 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.27□□□□□ -0.13
HMGN2P05204 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN2P05204 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.27□□□□□ -0.13
HMGN2P05204 AC027796.2-201ENST00000575326 344 ntBASIC14.27□□□□□ -0.13
HMGN2P05204 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 AC009118.2-201ENST00000613275 655 ntBASIC14.27□□□□□ -0.13
HMGN2P05204 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGN2P05204 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HMGN2P05204 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGN2P05204 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.27□□□□□ -0.13
HMGN2P05204 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.27□□□□□ -0.13
HMGN2P05204 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 AL158070.2-201ENST00000623713 1621 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 AC018529.2-202ENST00000611482 3087 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 SLC7A15P-201ENST00000424028 1363 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGN2P05204 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HMGN2P05204 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 MIR770-201ENST00000390219 98 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGN2P05204 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGN2P05204 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 AC055876.2-201ENST00000531834 546 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.26□□□□□ -0.13
HMGN2P05204 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.26□□□□□ -0.13
HMGN2P05204 BRI3BPP1-201ENST00000594224 787 ntBASIC14.26□□□□□ -0.13
HMGN2P05204 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.26□□□□□ -0.13
HMGN2P05204 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HMGN2P05204 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMGN2P05204 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
HMGN2P05204 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HMGN2P05204 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMGN2P05204 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms