Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC026120.1-201ENST00000611536 926 ntBASIC11.66□□□□□ -0.54
TCRAP04437 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 AC055811.4-201ENST00000624039 1754 ntBASIC11.66□□□□□ -0.54
TCRAP04437 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.66□□□□□ -0.54
TCRAP04437 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TCRAP04437 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TCRAP04437 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
TCRAP04437 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.65□□□□□ -0.54
TCRAP04437 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 ADH5P3-201ENST00000433842 1137 ntBASIC11.65□□□□□ -0.54
TCRAP04437 HIST3H2BA-201ENST00000436555 524 ntBASIC11.65□□□□□ -0.54
TCRAP04437 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 TPT1P11-201ENST00000458482 498 ntBASIC11.65□□□□□ -0.54
TCRAP04437 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 AC079140.1-201ENST00000508039 487 ntBASIC11.65□□□□□ -0.54
TCRAP04437 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.65□□□□□ -0.54
TCRAP04437 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 AC092865.6-201ENST00000642101 219 ntBASIC11.65□□□□□ -0.54
TCRAP04437 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.65□□□□□ -0.54
TCRAP04437 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
TCRAP04437 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
TCRAP04437 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms