Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM16O95361 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM16O95361 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM16O95361 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM16O95361 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM16O95361 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM16O95361 RN7SL399P-201ENST00000471648 279 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 AP000812.2-201ENST00000538934 718 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 RHOQP1-201ENST00000555758 579 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 MIR5189-201ENST00000577370 114 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 AC010328.2-201ENST00000597698 1111 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM16O95361 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 TMBIM7P-203ENST00000641617 1718 ntBASIC15.53■□□□□ 0.08
TRIM16O95361 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM16O95361 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM16O95361 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM16O95361 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM16O95361 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM16O95361 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM16O95361 AC013268.4-201ENST00000637413 2228 ntBASIC15.52■□□□□ 0.08
TRIM16O95361 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.52■□□□□ 0.08
TRIM16O95361 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM16O95361 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM16O95361 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM16O95361 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM16O95361 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM16O95361 ENPP7P5-201ENST00000541031 1031 ntBASIC15.52■□□□□ 0.08
TRIM16O95361 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM16O95361 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM16O95361 PTP4A1P2-201ENST00000546033 454 ntBASIC15.52■□□□□ 0.08
TRIM16O95361 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM16O95361 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.52■□□□□ 0.08
TRIM16O95361 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM16O95361 LINC01115-203ENST00000606068 577 ntBASIC15.52■□□□□ 0.08
TRIM16O95361 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.07
TRIM16O95361 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM16O95361 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM16O95361 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM16O95361 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM16O95361 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM16O95361 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM16O95361 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM16O95361 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM16O95361 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM16O95361 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms