Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SIX3O95343 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX3O95343 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SIX3O95343 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SIX3O95343 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.95□□□□□ -0.02
SIX3O95343 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 KRT18P28-201ENST00000453838 1332 ntBASIC14.94□□□□□ -0.02
SIX3O95343 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 LINC01230-201ENST00000625222 3017 ntBASIC14.94□□□□□ -0.02
SIX3O95343 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.94□□□□□ -0.02
SIX3O95343 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.94□□□□□ -0.02
SIX3O95343 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 MEIS3P1-201ENST00000495167 958 ntBASIC14.94□□□□□ -0.02
SIX3O95343 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.94□□□□□ -0.02
SIX3O95343 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 AL391069.4-201ENST00000609583 481 ntBASIC14.94□□□□□ -0.02
SIX3O95343 AC008738.7-201ENST00000609744 511 ntBASIC14.94□□□□□ -0.02
SIX3O95343 AC004840.1-201ENST00000636359 365 ntBASIC14.94□□□□□ -0.02
SIX3O95343 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.94□□□□□ -0.02
SIX3O95343 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.94□□□□□ -0.02
SIX3O95343 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SIX3O95343 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SIX3O95343 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 AP001267.2-201ENST00000532619 2086 ntBASIC14.93□□□□□ -0.02
SIX3O95343 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 HMGN1P19-201ENST00000436976 333 ntBASIC14.93□□□□□ -0.02
SIX3O95343 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.93□□□□□ -0.02
SIX3O95343 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.93□□□□□ -0.02
SIX3O95343 AC004790.1-201ENST00000612686 536 ntBASIC14.93□□□□□ -0.02
SIX3O95343 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.93□□□□□ -0.02
SIX3O95343 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.93□□□□□ -0.02
SIX3O95343 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.93□□□□□ -0.02
SIX3O95343 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SIX3O95343 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SIX3O95343 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms