Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 AL355864.2-201ENST00000447420 863 ntBASIC14.3□□□□□ -0.12
CTNSO60931 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.3□□□□□ -0.12
CTNSO60931 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CTNSO60931 USP32P1-208ENST00000506594 1164 ntBASIC14.3□□□□□ -0.12
CTNSO60931 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.3□□□□□ -0.12
CTNSO60931 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.3□□□□□ -0.12
CTNSO60931 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CTNSO60931 AC233724.13-201ENST00000598383 410 ntBASIC14.3□□□□□ -0.12
CTNSO60931 AL022328.1-201ENST00000610050 478 ntBASIC14.3□□□□□ -0.12
CTNSO60931 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.3□□□□□ -0.12
CTNSO60931 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CTNSO60931 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.3□□□□□ -0.12
CTNSO60931 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.3□□□□□ -0.12
CTNSO60931 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.3□□□□□ -0.12
CTNSO60931 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.3□□□□□ -0.12
CTNSO60931 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 REXO1L2P-201ENST00000425429 2069 ntBASIC14.3□□□□□ -0.12
CTNSO60931 AGAP7P-201ENST00000582299 2062 ntBASIC14.3□□□□□ -0.12
CTNSO60931 AGAP14-201ENST00000624701 2060 ntBASIC14.3□□□□□ -0.12
CTNSO60931 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CTNSO60931 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.3□□□□□ -0.12
CTNSO60931 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CTNSO60931 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CTNSO60931 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.3□□□□□ -0.12
CTNSO60931 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CTNSO60931 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.29□□□□□ -0.12
CTNSO60931 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.29□□□□□ -0.12
CTNSO60931 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 DUX4L47-201ENST00000566374 394 ntBASIC14.29□□□□□ -0.12
CTNSO60931 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.29□□□□□ -0.12
CTNSO60931 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.29□□□□□ -0.12
CTNSO60931 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.29□□□□□ -0.12
CTNSO60931 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 LILRP1-201ENST00000444199 1370 ntBASIC14.29□□□□□ -0.12
CTNSO60931 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CTNSO60931 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.29□□□□□ -0.12
CTNSO60931 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CTNSO60931 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CTNSO60931 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CTNSO60931 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms