Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 AC093433.1-201ENST00000458048 571 ntBASIC18.8■□□□□ 0.6
SMARCA5O60264 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SMARCA5O60264 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SMARCA5O60264 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.8■□□□□ 0.6
SMARCA5O60264 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 AC139749.1-202ENST00000617529 3139 ntBASIC18.8■□□□□ 0.6
SMARCA5O60264 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMARCA5O60264 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCA5O60264 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 KLF2P2-201ENST00000416807 1039 ntBASIC18.79■□□□□ 0.6
SMARCA5O60264 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCA5O60264 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCA5O60264 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCA5O60264 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.79■□□□□ 0.6
SMARCA5O60264 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCA5O60264 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.79■□□□□ 0.6
SMARCA5O60264 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMARCA5O60264 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCA5O60264 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMARCA5O60264 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.79■□□□□ 0.6
SMARCA5O60264 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 AL139094.1-201ENST00000405549 1188 ntBASIC18.78■□□□□ 0.6
SMARCA5O60264 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCA5O60264 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMARCA5O60264 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCA5O60264 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.78■□□□□ 0.6
SMARCA5O60264 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SMARCA5O60264 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCA5O60264 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SMARCA5O60264 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCA5O60264 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCA5O60264 LINC01101-201ENST00000622953 1884 ntBASIC18.77■□□□□ 0.6
SMARCA5O60264 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SMARCA5O60264 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 AC023090.2-201ENST00000625182 2110 ntBASIC18.77■□□□□ 0.6
SMARCA5O60264 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCA5O60264 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms