Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.51■□□□□ 0.07
RIPK2O43353 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 ACTG1P14-201ENST00000446382 1122 ntBASIC15.51■□□□□ 0.07
RIPK2O43353 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.51■□□□□ 0.07
RIPK2O43353 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.51■□□□□ 0.07
RIPK2O43353 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.51■□□□□ 0.07
RIPK2O43353 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RIPK2O43353 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.51■□□□□ 0.07
RIPK2O43353 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RIPK2O43353 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RIPK2O43353 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.51■□□□□ 0.07
RIPK2O43353 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RIPK2O43353 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.5■□□□□ 0.07
RIPK2O43353 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RIPK2O43353 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 AL121723.1-201ENST00000445194 1519 ntBASIC15.5■□□□□ 0.07
RIPK2O43353 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.5■□□□□ 0.07
RIPK2O43353 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RIPK2O43353 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 AC015922.1-201ENST00000421102 1152 ntBASIC15.5■□□□□ 0.07
RIPK2O43353 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.5■□□□□ 0.07
RIPK2O43353 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.5■□□□□ 0.07
RIPK2O43353 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.5■□□□□ 0.07
RIPK2O43353 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 AC003101.2-201ENST00000612557 442 ntBASIC15.5■□□□□ 0.07
RIPK2O43353 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 AF228730.6-201ENST00000641497 218 ntBASIC15.5■□□□□ 0.07
RIPK2O43353 AC084121.3-201ENST00000641716 218 ntBASIC15.5■□□□□ 0.07
RIPK2O43353 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RIPK2O43353 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.5■□□□□ 0.07
RIPK2O43353 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RIPK2O43353 AC018665.1-201ENST00000622927 1362 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 AL360270.3-201ENST00000609118 1348 ntBASIC15.49■□□□□ 0.07
RIPK2O43353 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RIPK2O43353 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RIPK2O43353 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RIPK2O43353 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RIPK2O43353 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms