Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 AC126365.1-201ENST00000578585 1514 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PCDH17O14917 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 AC007686.3-201ENST00000619017 3487 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 AC079776.1-201ENST00000401540 1152 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDH17O14917 ACTG1P3-201ENST00000431775 1114 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 KRT43P-201ENST00000434019 910 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
PCDH17O14917 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDH17O14917 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDH17O14917 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 AC120045.2-201ENST00000567334 178 ntBASIC14.62□□□□□ -0.07
PCDH17O14917 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDH17O14917 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDH17O14917 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PCDH17O14917 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDH17O14917 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDH17O14917 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCDH17O14917 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 AC026748.1-201ENST00000624349 3251 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 MIR600HG-201ENST00000449175 5984 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 KRT18P64-201ENST00000434946 1219 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 ACA64.2-201ENST00000459014 129 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.61□□□□□ -0.07
PCDH17O14917 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH17O14917 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDH17O14917 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
PCDH17O14917 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 CU634019.7-201ENST00000624153 1185 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 FP236241.2-201ENST00000624906 1185 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.61□□□□□ -0.07
PCDH17O14917 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.61□□□□□ -0.07
PCDH17O14917 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDH17O14917 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDH17O14917 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
PCDH17O14917 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms