Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
UPK2O00526 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
UPK2O00526 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK2O00526 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
UPK2O00526 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK2O00526 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
UPK2O00526 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
UPK2O00526 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK2O00526 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
UPK2O00526 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK2O00526 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UPK2O00526 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 KRT18P13-201ENST00000400056 1290 ntBASIC12.27□□□□□ -0.45
UPK2O00526 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 AC114501.2-201ENST00000439631 535 ntBASIC12.27□□□□□ -0.45
UPK2O00526 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 AC097493.3-201ENST00000509725 367 ntBASIC12.27□□□□□ -0.45
UPK2O00526 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.27□□□□□ -0.45
UPK2O00526 AL590560.3-201ENST00000623350 461 ntBASIC12.27□□□□□ -0.45
UPK2O00526 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK2O00526 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.27□□□□□ -0.45
UPK2O00526 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
UPK2O00526 AC100757.3-201ENST00000622361 1406 ntBASIC12.27□□□□□ -0.45
UPK2O00526 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
UPK2O00526 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
UPK2O00526 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK2O00526 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
UPK2O00526 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.26□□□□□ -0.45
UPK2O00526 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
UPK2O00526 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 FAM86GP-201ENST00000448322 971 ntBASIC12.26□□□□□ -0.45
UPK2O00526 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 MEIS3P1-201ENST00000495167 958 ntBASIC12.26□□□□□ -0.45
UPK2O00526 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
UPK2O00526 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms