Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC090114.2-201ENST00000608477 7054 ntBASIC9.7□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC011481.3-201ENST00000623895 5594 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CICP11-201ENST00000434745 2827 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 Z82170.1-201ENST00000625081 3192 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RNU1-129P-201ENST00000384064 167 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 GHSR-202ENST00000427970 912 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC139887.3-201ENST00000568585 713 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 U1.21-201ENST00000580816 167 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC011498.5-201ENST00000592027 486 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AL691432.1-201ENST00000596308 1422 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AL031055.1-201ENST00000606362 631 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SPTSSB-204ENST00000617024 1292 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 HYMAI.1-201ENST00000620949 238 ntBASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TMEM256-PLSCR3K7ERE1 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms