Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AC245100.3-201ENST00000441281 285 ntBASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AC104306.2-201ENST00000451877 341 ntBASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 EEF1DP1-201ENST00000585891 896 ntBASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTDP1Q9Y5B0 AP005117.1-202ENST00000581724 1908 ntBASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 GOLGA2P4-201ENST00000441462 777 ntBASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 AP006547.1-201ENST00000563435 692 ntBASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.6■□□□□ 0.41
CTDP1Q9Y5B0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms