Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 CICP13-201ENST00000422015 2789 ntBASIC16.52■□□□□ 0.23
USP15Q9Y4E8 REXO1L8P-201ENST00000604378 1897 ntBASIC16.52■□□□□ 0.23
USP15Q9Y4E8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USP15Q9Y4E8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 AC069224.1-201ENST00000566372 1715 ntBASIC16.51■□□□□ 0.23
USP15Q9Y4E8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 AC007969.1-201ENST00000433675 447 ntBASIC16.51■□□□□ 0.23
USP15Q9Y4E8 SLED1-202ENST00000512051 380 ntBASIC16.51■□□□□ 0.23
USP15Q9Y4E8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
USP15Q9Y4E8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 MIR663B-201ENST00000408361 115 ntBASIC16.5■□□□□ 0.23
USP15Q9Y4E8 BTBD6P1-201ENST00000412176 1267 ntBASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 AKR7A2P1-201ENST00000460134 915 ntBASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 AC022137.2-201ENST00000503482 481 ntBASIC16.5■□□□□ 0.23
USP15Q9Y4E8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
USP15Q9Y4E8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP15Q9Y4E8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms