Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 WASH3P-207ENST00000560956 1394 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 FO538757.1-201ENST00000623083 1397 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 CICP8-201ENST00000455800 2813 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AL031284.1-201ENST00000419297 478 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC092474.2-201ENST00000424288 719 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC140658.5-201ENST00000438532 169 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC009947.1-201ENST00000444350 727 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC002347.1-201ENST00000569543 541 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC073439.1-201ENST00000624121 1774 ntBASIC13.11□□□□□ -0.31
COMMD9Q9P000 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COMMD9Q9P000 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.11□□□□□ -0.31
COMMD9Q9P000 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 AL589702.1-201ENST00000641229 1509 ntBASIC13.1□□□□□ -0.31
COMMD9Q9P000 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COMMD9Q9P000 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COMMD9Q9P000 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms