Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 HLA-V-204ENST00000476601 1289 ntBASIC15.06■□□□□ 0
MKS1Q9NXB0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 AC010336.2-201ENST00000564226 506 ntBASIC15.06■□□□□ 0
MKS1Q9NXB0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.06■□□□□ 0
MKS1Q9NXB0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.05■□□□□ 0
MKS1Q9NXB0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.05■□□□□ 0
MKS1Q9NXB0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.05■□□□□ 0
MKS1Q9NXB0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
MKS1Q9NXB0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 AL137784.3-201ENST00000623858 2288 ntBASIC15.05■□□□□ 0
MKS1Q9NXB0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.05■□□□□ 0
MKS1Q9NXB0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
MKS1Q9NXB0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.05■□□□□ 0
MKS1Q9NXB0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
MKS1Q9NXB0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.05■□□□□ 0
MKS1Q9NXB0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC005829.1-201ENST00000570002 483 ntBASIC15.05■□□□□ -0
MKS1Q9NXB0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.05■□□□□ -0
MKS1Q9NXB0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC093525.8-201ENST00000624099 1342 ntBASIC15.05■□□□□ -0
MKS1Q9NXB0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC090505.1-201ENST00000430515 1834 ntBASIC15.05■□□□□ -0
MKS1Q9NXB0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.05■□□□□ -0
MKS1Q9NXB0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.05■□□□□ -0
MKS1Q9NXB0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MKS1Q9NXB0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MKS1Q9NXB0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MKS1Q9NXB0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MKS1Q9NXB0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.04■□□□□ -0
MKS1Q9NXB0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MKS1Q9NXB0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MKS1Q9NXB0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MKS1Q9NXB0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MKS1Q9NXB0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms