Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC52A1Q9NWF4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 RPL17P45-201ENST00000586289 509 ntBASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC52A1Q9NWF4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AL512430.1-201ENST00000392575 860 ntBASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AP000358.1-201ENST00000456260 156 ntBASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 AC007881.3-201ENST00000608897 607 ntBASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SLC52A1Q9NWF4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
SLC52A1Q9NWF4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 AC015909.3-201ENST00000572855 1794 ntBASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 KRT18P36-201ENST00000411618 1276 ntBASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 BANF1P3-201ENST00000412556 261 ntBASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 SIGLEC18P-201ENST00000602271 909 ntBASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 AC009560.1-201ENST00000620208 434 ntBASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC52A1Q9NWF4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 AP000845.1-201ENST00000581677 2131 ntBASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC52A1Q9NWF4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms