Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 AC004461.2-201ENST00000629517 803 ntBASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC68Q9H2F9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AC025181.2-201ENST00000606994 802 ntBASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AC106028.4-201ENST00000614509 607 ntBASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AC093512.1-201ENST00000617969 520 ntBASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MROH4P-201ENST00000431302 1578 ntBASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC68Q9H2F9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 GHSR-202ENST00000427970 912 ntBASIC15.38■□□□□ 0.05
CCDC68Q9H2F9 AC055876.3-201ENST00000431496 288 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms